{
"@context": "/terms/",
"@id": "/analysis-sets/IGVFDS4435CQCE/",
"@type": [
"AnalysisSet",
"FileSet",
"Item"
],
"accession": "IGVFDS4435CQCE",
"aliases": [
"igvf:analysis_set_with_input"
],
"assay_titles": [],
"audit": {
"ERROR": [
{
"category": "unexpected input file set",
"detail": "Analysis set [IGVFDS4435CQCE](/analysis-sets/IGVFDS4435CQCE/) links to file set(s): [IGVFDS7640LVLT](/analysis-sets/IGVFDS7640LVLT/) in `input_file_sets` that are not represented in the `derived_from` of the file sets of the files in this analysis. The analysis set input files are expected to belong to the input file sets.",
"level": 60,
"level_name": "ERROR",
"name": "audit_input_file_sets_derived_from",
"path": "/analysis-sets/IGVFDS4435CQCE/"
}
],
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released analysis set [IGVFDS4435CQCE](/analysis-sets/IGVFDS4435CQCE/) has in progress subobject document [d8ce793f-933b-45ea-9611-1c3f80cb7e11](/documents/d8ce793f-933b-45ea-9611-1c3f80cb7e11/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/analysis-sets/IGVFDS4435CQCE/"
}
],
"WARNING": [
{
"category": "missing files",
"detail": "Analysis set [IGVFDS4435CQCE](/analysis-sets/IGVFDS4435CQCE/) has no `files`. File sets are expected to have files.",
"level": 40,
"level_name": "WARNING",
"name": "audit_no_files",
"path": "/analysis-sets/IGVFDS4435CQCE/"
}
]
},
"award": {
"@id": "/awards/HG012012/",
"component": "data coordination",
"title": "A Data and Administrative Coordinating Center for the Impact of Genomic Variation on Function Consortium"
},
"control_for": [],
"creation_timestamp": "2023-04-27T18:57:04.200509+00:00",
"description": "An analysis set with an input file set.",
"documents": [
"/documents/d8ce793f-933b-45ea-9611-1c3f80cb7e11/"
],
"file_set_type": "intermediate analysis",
"files": [],
"functional_assay_mechanisms": [],
"input_file_sets": [
{
"@id": "/analysis-sets/IGVFDS7640LVLT/",
"accession": "IGVFDS7640LVLT",
"aliases": [
"igvf:s"
],
"file_set_type": "intermediate analysis",
"status": "released"
}
],
"input_for": [],
"lab": {
"@id": "/labs/j-michael-cherry/",
"title": "J. Michael Cherry, Stanford"
},
"notes": "This analyis set has been defaulted to \"intermediate analysis\" for its file_set_type as this is now a required property, please see the property description and patch with the appropriate file_set_type.",
"protocols": [],
"release_timestamp": "2023-04-27T18:57:04.174682+00:00",
"samples": [],
"schema_version": "9",
"status": "released",
"submitted_by": {
"@id": "/users/1e75d989-a438-4d77-a451-8a297fd3636e/",
"title": "Ian Whaling"
},
"submitter_comment": "Comment for an analysis set.",
"summary": "Unspecified assay",
"uuid": "51dec0a8-caa0-4a69-be0f-1cf7c1d6f60c",
"workflows": []
}