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MeasurementSet
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IGVFDS1953KIOT
IGVFDS1953KIOT
released
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File Set Type
experimental data
Summary
CRISPR prime editing VAMP-seq integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Assay Term
in vitro CRISPR screen assay
Sample Summaries
Homo sapiens (male) THP-1 cell line modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library
Aliases
lea-starita:F9-DMS-Heavy-chain-antibody-Tile2-Replicate1-Bin3-FileSet_idan
igvf:my-alias
Attribution
Doug Fowler, UW
(
HG011969
—
Lea Starita
)
Donors
1 item
Accession
Aliases
Sex
Taxa
IGVFDO7359LVPI
igvf:donor_of_THP1
male
Homo sapiens
Associated Construct Library Sets
1 item
Accession
Summary
Library Design Files
IGVFDS7068CPID
guide (sgRNA) library targeting sequence variants in a genomic locus
File Sets Using This Measurement Set as an Input
1 item
Accession
Type
Summary
Aliases
Lab
IGVFDS7736VVSH
AnalysisSet
CRISPR prime editing VAMP-seq integrating an expression vector library of tile tile3 of INTS11 (AA 299-461) (sequence variants) and a guide (sgRNA) library targeting sequence variants in a genomic locus
lea-starita:F9-DMS-Scores_idan
Doug Fowler, UW