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IGVFDS2075SWXE

released
File Set Type
experimental data
Summary
CRISPR scRNA-seq integrating a guide (sgRNA) library targeting TF binding sites, phenotype-associated variants genome-wide associated with DiGeorge syndrome
Assay Term
single-cell RNA sequencing assay
Sample Summaries
  • multiplexed sample: Homo sapiens (female) H9 differentiated cell specimen induced to neural progenitor cell for 30 minutes (cellular sub pool: K80_A2); Homo sapiens (male) endothelial cell line (sorting details: detail of the fraction) depleted of lipopolysaccharide for 6 hours, transfected with a guide library; ... and 4 more samples
Aliases
igvf:multiome_scrna_seq

Donors

5 items
Aliases
  • igvf:donor_of_HUDEP-2
unspecified
Homo sapiens
  • igvf:donor_of_H9
female
Homo sapiens
  • igvf:donor_of_HAP-1
male
Homo sapiens
  • igvf:donor_of_teloHAEC
female
Homo sapiens
  • danwei-huangfu:donor_HUES8
male
Homo sapiens

Associated Construct Library Sets

1 item
Accession
Summary
Library Design Files
guide (sgRNA) library targeting TF binding sites, phenotype-associated variants genome-wide associated with DiGeorge syndrome

Attribution

Award
HG012051
Principal Investigator(s)
Contact P.I.
Danwei Huangfu
Lab
Danwei Huangfu, MSKCC