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File Set Type

10 items
IGVFDS1953KIOT
  • lea-starita:F9-DMS-Heavy-chain-antibody-Tile2-Replicate1-Bin3-FileSet_idan
  • igvf:my-alias
experimental data
VAMP-seq
released
VAMP-seq integrating an expression vector library of tile tile3 of INTS11 (AA 299-461) (sequence variants)
Homo sapiens
ff3751eb-8590-4c56-ab5d-5b00960f510a
IGVFDS5518TESD
  • jesse-engreitz:220829_8merInsertion-Jurkat_NoStimulation-Amp_PPIF_promoter-BioRep2-FFrep1-BinA_AmpliconSequencing_idan
experimental data
Variant-EFFECTS
released
CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus
Homo sapiens
fd86ed6d-e3d5-45d6-b8fb-ae5e113190b2
IGVFDS4947SYUV
  • lea-starita:F9-DMS-Light-chain-antibody-Tile2-Replicate1-Bin4-FileSet_idan
experimental data
VAMP-seq
revoked
VAMP-seq integrating an expression vector library of tile tile3 of INTS11 (AA 299-461) (sequence variants)
Homo sapiens
fc2de044-7ae5-4861-8ea2-dc0d2f2cd6cd
IGVFDS9381NVXK
  • lea-starita:F9-DMS-Strep-II-tag-antibody-Tile1-Replicate3-Bin4-FileSet_idan
experimental data
VAMP-seq
archived
VAMP-seq integrating an expression vector library of tile tile3 of INTS11 (AA 299-461) (sequence variants)
Homo sapiens
fb6a3392-1e6f-4114-b056-f7429e0194a6
IGVFDS7068CPID
  • jesse-engreitz:8merInsertion-pegRNALibrarySequencing
guide library
loci
sequence variants
released
guide (sgRNA) library targeting sequence variants in a genomic locus
af6a3a0c-9a0b-4140-bbde-703fd69668f7
IGVFDS7640LVLT
  • igvf:s
intermediate analysis
released
Unspecified assay: alignments, genome reference, peaks, sparse gene count matrix, transcriptome alignments
6d0717f6-cb4f-4e97-9b65-5ca0ced173d3
IGVFDS3910MZMQ
  • igvf:multiome_scatac_seq
experimental data
VAMP-seq
released
CRISPR VAMP-seq integrating a guide (sgRNA) library targeting TF binding sites, phenotype-associated variants genome-wide associated with DiGeorge syndrome
Homo sapiens
5663d0c7-faee-4c10-8ef5-c827fd74ad28
IGVFDS4435CQCE
  • igvf:analysis_set_with_input
intermediate analysis
released
Unspecified assay
51dec0a8-caa0-4a69-be0f-1cf7c1d6f60c
IGVFDS2075SWXE
  • igvf:multiome_scrna_seq
experimental data
10x multiome
released
CRISPR single-cell RNA sequencing assay (10x multiome) integrating a guide (sgRNA) library targeting TF binding sites, phenotype-associated variants genome-wide associated with DiGeorge syndrome
Homo sapiens
4102848f-4d47-4fd4-9491-b77ce7c9dbb1
IGVFDS1317BKCD
  • lior-pachter:share_seq
experimental data
SHARE-seq
released
SHARE-seq (SHARE-seq)
Mus musculus
269ae1c1-060c-4ef4-8903-2284689779ed